Description Usage Arguments Value See Also Examples
Prepare peptide annotation from long format data frame
Create light-weight peptide annotation data frame for selection of illustrative proteins
1 2 3 4 5 | create_peptide_annotation(
df_long,
feature_id_col = "peptide_group_label",
protein_col = c("ProteinName", "Gene")
)
|
df_long |
data frame where each row is a single feature in a single
sample. It minimally has a |
feature_id_col |
name of the column with feature/gene/peptide/protein
ID used in the long format representation |
protein_col |
column where protein names are specified |
data frame containing petpide annotations
plot_peptides_of_one_protein
,
plot_protein_corrplot
1 2 3 | generated_peptide_annotation <- create_peptide_annotation(
example_proteome, feature_id_col = "peptide_group_label",
protein_col = c("Protein"))
|
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