labelRatio: Calculate the labeling efficiency of isobaric labeling data
In proteoQC: An R package for proteomics data quality control
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Calculate the labeling efficiency of isobaric labeling data
Usage
1
labelRatio(ms = NULL, reporter = 1, plot = TRUE)
Arguments
ms
MS/MS file.
reporter
Isobaric tag class, 1=iTRAQ-4plex, 2=iTRAQ-8plex, 3=TMT-6plex.
4=TMT-10plex.
plot
Logical value
Value
A vector object
Author(s)
Bo Wen wenbo@genomics.cn
Examples
1
2
3
mgf.zip <- system.file("extdata/mgf.zip", package = "proteoQC")
unzip(mgf.zip)
a <- labelRatio("test.mgf",reporter=2)
proteoQC documentation built on Oct. 31, 2019, 3:20 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
Calculate the labeling efficiency of isobaric labeling data
Usage
1 | labelRatio(ms = NULL, reporter = 1, plot = TRUE)
|
Arguments
ms |
MS/MS file. |
reporter |
Isobaric tag class, 1=iTRAQ-4plex, 2=iTRAQ-8plex, 3=TMT-6plex. 4=TMT-10plex. |
plot |
Logical value |
Value
A vector object
Author(s)
Bo Wen wenbo@genomics.cn
Examples
1 2 3 | mgf.zip <- system.file("extdata/mgf.zip", package = "proteoQC")
unzip(mgf.zip)
a <- labelRatio("test.mgf",reporter=2)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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