pulsedSilac: Analysis of pulsed-SILAC quantitative proteomics data

This package provides several tools for pulsed-SILAC data analysis. Functions are provided to organize the data, calculate isotope ratios, isotope fractions, model protein turnover, compare turnover models, estimate cell growth and estimate isotope recycling. Several visualization tools are also included to do basic data exploration, quality control, condition comparison, individual model inspection and model comparison.

Package details

AuthorMarc Pagès-Gallego, Tobias B. Dansen
Bioconductor views Proteomics
MaintainerMarc Pagès-Gallego <M.PagesGallego@umcutrecht.nl>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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pulsedSilac documentation built on Nov. 8, 2020, 5:13 p.m.