readsffgeometry: Read in basic statistics about an sff file

Description Usage Arguments Value Author(s) Examples

Description

readSffGeometry processes a sff file or set of sff files, counting the number of reads and the length of each read.

Usage

1
readSffGeometry(filenames)

Arguments

filenames

File or files to be read in.

Value

A list with two elements, nReads and Read_Widths

Author(s)

Matt Settles <msettles@uidaho.edu>

Examples

1
2
3
sffgeom <- readSffGeometry(system.file("extdata","Small454Test.sff",package="rSFFreader"))
sffgeom$nReads
sffgeom$Read_Widths

rSFFreader documentation built on May 20, 2017, 10:08 p.m.

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