Description Usage Arguments Value Author(s) Examples
This function fills the coverage
field in the
main input
argument in recoup
function.
1 2 3 | coverageRef(input, mainRanges,
strandedParams = list(strand=NULL, ignoreStrand=TRUE),
rc = NULL)
|
input |
an input list as in |
mainRanges |
the |
strandedParams |
see the |
rc |
fraction (0-1) of cores to use in a multicore
system. It defaults to |
Same as input with the ranges
fields filled.
Panagiotis Moulos
1 2 3 4 5 6 7 8 9 10 | # Load some data
data("recoup_test_data",package="recoup")
# Calculate coverages
testGenomeRanges <- makeGRangesFromDataFrame(df=test.genome,
keep.extra.columns=TRUE)
test.input <- coverageRef(
test.input,
mainRanges=testGenomeRanges
)
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.