regsplice: L1-regularization based methods for detection of differential splicing

Statistical methods for detection of differential splicing (differential exon usage) in RNA-seq and exon microarray data, using L1-regularization (lasso) to improve power.

Package details

AuthorLukas M. Weber [aut, cre]
Bioconductor views AlternativeSplicing DifferentialExpression DifferentialSplicing ExonArray ExperimentalDesign ImmunoOncology Microarray RNASeq Sequencing Software
MaintainerLukas M. Weber <lukas.weber.edu@gmail.com>
LicenseMIT + file LICENSE
Version1.14.0
URL https://github.com/lmweber/regsplice
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("regsplice")

Try the regsplice package in your browser

Any scripts or data that you put into this service are public.

regsplice documentation built on April 29, 2020, 5:05 a.m.