gtexTiss: Convenience function for access to gene-level GTEx tissues,...
In restfulSE: Access matrix-like HDF5 server content or BigQuery content through a SummarizedExperiment interface
Description
Usage
Arguments
Value
Examples
Description
Convenience function for access to gene-level GTEx tissues, as quantified in recount
Usage
1
gtexTiss(endpoint = URL_hsds(), svrtype = "hsds", dsetname = "/assay001")
Arguments
endpoint
endpoint URL of remote server
svrtype
type of server, must be either 'hsds' or 'h5serv'
dsetname
complete internal path to dataset in H5 file
Value
SummarizedExperiment instance
Examples
1
gtexTiss()
restfulSE documentation built on Nov. 8, 2020, 8:01 p.m.
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Description Usage Arguments Value Examples
Description
Convenience function for access to gene-level GTEx tissues, as quantified in recount
Usage
1 | gtexTiss(endpoint = URL_hsds(), svrtype = "hsds", dsetname = "/assay001")
|
Arguments
endpoint |
endpoint URL of remote server |
svrtype |
type of server, must be either 'hsds' or 'h5serv' |
dsetname |
complete internal path to dataset in H5 file |
Value
SummarizedExperiment instance
Examples
1 | gtexTiss()
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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