API for ropls
PCA, PLS(-DA) and OPLS(-DA) for multivariate analysis and feature selection of omics data
| Global functions | |
|---|---|
| .checkRformatF | Source code |
| .checkW4mFormatF | Source code |
| .coreF | Source code |
| .dimNames | Source code |
| .drawAxis | Source code |
| .drawImage | Source code |
| .drawScale | Source code |
| .errorF | Source code |
| .genVec | Source code |
| .header | Source code |
| .log10F | Source code |
| .palette | Source code |
| .plotColorF | Source code |
| .plotEllipseF | Source code |
| .plotF | Source code |
| .plotLegendF | Source code |
| .prettyAxis | Source code |
| .similarityF | Source code |
| .table | Source code |
| .truncate | Source code |
| aminoacids | Man page |
| cellulose | Man page |
| checkW4M | Man page |
| checkW4M,ExpressionSet-method | Man page |
| coef,opls-method | Man page |
| coef.opls | Man page |
| cornell | Man page |
| fitted,opls-method | Man page |
| fitted.opls | Man page |
| foods | Man page |
| fromW4M | Man page Source code |
| getEset | Man page |
| getEset, | Man page |
| getEset,opls-method | Man page |
| getLoadingMN | Man page |
| getLoadingMN,opls-method | Man page |
| getMset | Man page |
| getMset, | Man page |
| getMset,oplsMultiDataSet-method | Man page |
| getPcaVarVn | Man page |
| getPcaVarVn,opls-method | Man page |
| getScoreMN | Man page |
| getScoreMN,opls-method | Man page |
| getSubsetVi | Man page |
| getSubsetVi,opls-method | Man page |
| getSummaryDF | Man page |
| getSummaryDF,opls-method | Man page |
| getVipVn | Man page |
| getVipVn,opls-method | Man page |
| getWeightMN | Man page |
| getWeightMN,opls-method | Man page |
| imageF | Man page Source code |
| linnerud | Man page |
| lowarp | Man page |
| mark | Man page |
| opls | Man page |
| opls,ExpressionSet-method | Man page |
| opls,MultiDataSet-method | Man page |
| opls,data.frame-method | Man page |
| opls,matrix-method | Man page |
| opls-class | Man page |
| opls-method | Man page |
| oplsMultiDataSet-class | Man page |
| oplsMultiDataSet-method | Man page |
| plot,opls,ANY-method | Man page |
| plot,opls-method | Man page |
| plot,oplsMultiDataSet,ANY-method | Man page |
| plot,oplsMultiDataSet-method | Man page |
| plot.opls | Man page |
| plot.oplsMultiDataSet | Man page |
| predict,opls-method | Man page |
| predict.opls | Man page |
| print,opls-method | Man page |
| print.opls | Man page |
| residuals | Man page |
| residuals,opls-method | Man page |
| residuals.opls | Man page |
| ropls | Man page |
| ropls-package | Man page |
| sacurine | Man page |
| show,opls-method | Man page |
| show.opls | Man page |
| strF | Man page Source code |
| tested | Man page |
| tested,opls-method | Man page |
| toW4M | Man page |
| toW4M,ExpressionSet-method | Man page |
| view | Man page |
| view,ExpressionSet-method | Man page |
| view,data.frame-method | Man page |
| view,matrix-method | Man page |
