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inst/scripts/cpneTrack.R
In rtracklayer: R interface to genome annotation files and the UCSC genome browser
library(GGtools)
if (!exists("hmceuB36.2021")) data(hmceuB36.2021)
## condense to founders only
hmFou = hmceuB36.2021[, which(hmceuB36.2021$isFounder)]
## show basic formula fit
f1 = gwSnpTests(genesym("CPNE1")~male, hmFou, chrnum(20))
cpneTrack <- as(f1, "GRanges")
save(cpneTrack, file="../../data/cpneTrack.rda")
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rtracklayer documentation built on Nov. 8, 2020, 6:50 p.m.
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library(GGtools)
if (!exists("hmceuB36.2021")) data(hmceuB36.2021)
## condense to founders only
hmFou = hmceuB36.2021[, which(hmceuB36.2021$isFounder)]
## show basic formula fit
f1 = gwSnpTests(genesym("CPNE1")~male, hmFou, chrnum(20))
cpneTrack <- as(f1, "GRanges")
save(cpneTrack, file="../../data/cpneTrack.rda")
Try the rtracklayer package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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