exactNBtest1: Perform only one exact test under the Negative Binomial...

In sSeq: Shrinkage estimation of dispersion in Negative Binomial models for RNA-seq experiments with small sample size

Description

One exact test for only one gene.

Usage

exactNBtest1(kA, kB, mu, disp, sA=1, sB=1, rA=0.5, rB=0.5)

Arguments

kA	An integer matrix under condition A.
kB	An integer under matrix condition B.
mu	The expectation.
disp	The dispersion.
sA	The size factors under condition A.
sB	The size factors under condition B.
rA	Proportion of samples that are under condition A.
rB	Proportion of samples that are under condition B.

Value

pval

P-value.

Examples

exactNBtest1(100, 150, 125, 1.1)

sSeq documentation built on Nov. 8, 2020, 5:52 p.m.