blockScores: SArKS input scores
In sarks: Suffix Array Kernel Smoothing for discovery of correlative sequence motifs and multi-motif domains
Description
Usage
Arguments
Value
Examples
Description
Extracts vector of input scores associated with input sequences
from sarks object.
Usage
1
blockScores(sarks)
Arguments
sarks
Sarks object from which information will be derived
Value
named numeric vector; names are the sequence names, values
are the associated scores. Note: Sarks internally sorts input
lexicographically by sequence name.
Examples
1
2
3
4
5
data(simulatedSeqs, simulatedScores)
sarks <- Sarks(simulatedSeqs, simulatedScores, 4, 0, 1)
simulatedScores2 <- blockScores(sarks)
## simulatedScores2 will be in different order than simulatedScores,
## but contains same information.
sarks documentation built on Nov. 8, 2020, 6:54 p.m.
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Description Usage Arguments Value Examples
Description
Extracts vector of input scores associated with input sequences from sarks object.
Usage
1 | blockScores(sarks)
|
Arguments
sarks |
Sarks object from which information will be derived |
Value
named numeric vector; names are the sequence names, values are the associated scores. Note: Sarks internally sorts input lexicographically by sequence name.
Examples
1 2 3 4 5 | data(simulatedSeqs, simulatedScores)
sarks <- Sarks(simulatedSeqs, simulatedScores, 4, 0, 1)
simulatedScores2 <- blockScores(sarks)
## simulatedScores2 will be in different order than simulatedScores,
## but contains same information.
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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