misc_upload_cli: Upload files using SBG uploader

In sbgr: R Client for Seven Bridges Genomics API

Description

Upload files using SBG uploader.

Usage

misc_upload_cli(auth_token = NULL, uploader = NULL, file = NULL,
  project_id = NULL, proxy = NULL)

Arguments

auth_token	auth token
uploader	The directory where the SBG uploader is located (the directory that contains the bin/ directory).
file	The location of the file to upload.
project_id	The project ID to upload the files to. If you do not supply this, then the uploader will place the incoming files in your "My Files" section.
proxy	Allows you to specify a proxy server through which the uploader should connect. About the details the proxy parameter format, see https://developer.sbgenomics.com/tools/uploader/documentation.

Value

The uploaded file's ID number.

References

https://developer.sbgenomics.com/tools/uploader/documentation

Examples

token = '420b4672ebfc43bab48dc0d18a32fb6f'
misc_upload_cli(auth_token = token,
                          uploader = '~/sbg-uploader/',
                          file = '~/example.fastq', project_id = '1234')

sbgr documentation built on Oct. 5, 2016, 4:14 a.m.