Files in scAlign

An alignment and integration method for single cell genomics

README.md

NEWS

NAMESPACE

DESCRIPTION

LICENSE

build/vignette.rds

data/cellbench.rda

R/backend_encoder.R R/utils.R R/train_decoder.R R/train_encoder.R R/architectures.R R/train_encoder_multi.R R/scAlignMulti.R R/scAlignClass.R R/scAlign.R R/data.R R/backend_decoder.R vignettes/scAlign.Rmd man/decoder_large.Rd man/encoderModel_add_semisup_loss_data_driven.Rd man/scAlignCreateObject.Rd man/encoderModel_gaussian_kernel.Rd man/cellbench.Rd man/gaussianKernel.Rd man/dot-data_setup.Rd man/scAlignMulti.Rd man/encoder_medium.Rd man/scAlignArguments.Rd man/encoder_small.Rd man/decoderModel_calc_projection.Rd man/PlotTSNE.Rd man/define_kernel_matrix.Rd man/compute_kernel_matrix.Rd man/decoderModel_add_mse_loss.Rd man/dot-check_tensorflow.Rd man/decoderModel_create_train_op.Rd man/encoderModel_embedding_to_logit.Rd man/alignment_score.Rd man/dot-plotTSNE.Rd man/encoderModel_train_encoder.Rd man/encoderModel_calc_logit.Rd man/encoderModel_train_encoder_multi.Rd man/encoderModel_data_to_embedding.Rd man/dot-is.wholenumber.Rd man/encoder_large.Rd man/decoder_small.Rd man/dot-check_all_args.Rd man/scAlign.Rd man/scAlignOptions.Rd man/encoderModel_calc_embedding.Rd man/decoderModel_train_decoder.Rd man/dot-learning_rate.Rd man/encoderModel_create_train_op.Rd man/decoderModel_emb_to_proj.Rd man/dot-early_stop.Rd man/decoder_medium.Rd man/encoderModel_add_logit_loss.Rd tests/testthat.R tests/testthat/test-scalign.R inst/doc/scAlign.R inst/doc/scAlign.Rmd inst/doc/scAlign.pdf

scAlign documentation built on April 28, 2020, 6:10 p.m.