getCellPairs: getCellPairs

In scDblFinder: scDblFinder

Description

Given a vector of cluster labels, returns pairs of cross-cluster cells

Usage

getCellPairs(x, n = 1000, ...)

Arguments

x	A vector of cluster labels for each cell, or a list containing metacells and graph
n	The number of cell pairs to obtain
...	Further arguments, for instance the 'k' vector of precluster labels if 'x' is a metacell graph.

Value

A data.frame with the columns

Examples

# create random labels
x <- sample(head(LETTERS), 100, replace=TRUE)
getCellPairs(x, n=6)

scDblFinder documentation built on Nov. 8, 2020, 5:48 p.m.