Files in scFeatureFilter

A correlation-based method for quality filtering of single-cell RNAseq data

README.md

NEWS

NAMESPACE

DESCRIPTION

LICENSE

build/vignette.rds

data/scData_hESC.rda

R/calculate_cvs.R R/get_mean_median.R R/correlate_windows.R R/sc_feature_filter.R R/correlations_to_densities.R R/scData_hESC.R R/plotting.R R/plot_top_window_autocor.R R/internal_createGeneExpressionMatrixFromDataFrame.R R/determine_bin_cutoff.R R/filter_expression_table.R R/binning.R vignettes/Introduction.Rmd man/get_mean_median.Rd man/plot_top_window_autocor.Rd man/correlations_to_densities.Rd man/correlate_windows.Rd man/determine_bin_cutoff.Rd man/plot_mean_variance.Rd man/calculate_cvs.Rd man/sc_feature_filter.Rd man/bin_scdata.Rd man/plot_metric.Rd man/scData_hESC.Rd man/define_top_genes.Rd man/plot_correlations_distributions.Rd man/filter_expression_table.Rd tests/testthat.R tests/runTests.R tests/testthat/test_correlate_windows.R tests/testthat/test_get_mean_median.R tests/testthat/test_correlations_to_denisties.R tests/testthat/test_.createGeneExpressionMatrixFromDataFrame.R tests/testthat/test_filter_expression_table.R tests/testthat/test_extract_top_genes.R tests/testthat/test_bin_scdata.R tests/testthat/test_calculate_cvs.R

inst/figure1_small.png

inst/NEWS

inst/CITATION

inst/doc/Introduction.R inst/doc/Introduction.Rmd

inst/doc/Introduction.html

scFeatureFilter documentation built on Nov. 8, 2020, 7:49 p.m.