By Angeles Arzalluz-Luque, Guillaume Devailly, Anna Mantsoki & Anagha Joshi.

scFeatureFilter outputs

An R package to set thresholds for feature (gene, transcript, ...) filtering in single cell RNA sequencing analyses.

How to install?

You can install the stable version of scFeatureFilter from Bioconductor (Require R version ≥ 3.5):

## try http:// if https:// URLs are not supported
if (!requireNamespace("BiocManager", quietly=TRUE))

You can install the development version of scFeatureFilter using devtools (Require R version ≥ 3.5):


Getting started

Load the package:


Then it is probably a good idea to read the package vignette:

vignette("Introduction", package = "scFeatureFilter")

Try the scFeatureFilter package in your browser

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scFeatureFilter documentation built on Nov. 8, 2020, 7:49 p.m.