scRepertoire: A toolkit for single-cell immune receptor profiling

scRepertoire was built to process data derived from the 10x Genomics Chromium Immune Profiling for both T-cell receptor (TCR) and immunoglobulin (Ig) enrichment workflows and subsequently interacts with the popular Seurat and SingleCellExperiment R packages.

Package details

AuthorNick Borcherding [aut, cre]
Bioconductor views Annotation Classification ImmunoOncology Sequencing SingleCell Software
MaintainerNick Borcherding <>
LicenseApache License 2.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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scRepertoire documentation built on Nov. 8, 2020, 7 p.m.