Files in scoreInvHap

Get inversion status in predefined regions

readme.md

NAMESPACE

DESCRIPTION

LICENSE

R/info.R R/getInvStatus.R R/classifSNPsImputation.R R/scoreInvHapRes_class.R R/scoreInvHap.R R/inversionGR.R R/classifSNPs.R R/getGenotypesTable.R R/scoreInvHap-package.R R/SNPsR2.R R/getAlleleTable.R R/correctAlleleTable.R R/hetRefs.R R/checkSNPs.R R/Refs.R inst/doc/scoreInvHap.R

inst/doc/scoreInvHap.html

inst/doc/scoreInvHap.Rmd

inst/extdata/example.vcf

inst/scripts/createGenomicRanges.R inst/scripts/checkSNPs.R

build/vignette.rds

tests/testthat.R tests/testthat/test_01_AlleleTable.R tests/testthat/test_02_scoreInvHap.R vignettes/scoreInvHap.Rmd

data/inversionGR.rda

data/Refs.rda

data/hetRefs.rda

data/info.rda

data/SNPsR2.rda

man/hetRefs.Rd man/computeScore.Rd man/info.Rd man/getAlleleTable.Rd man/getGenotypesTable.Rd man/getInvStatus.Rd man/correctAlleleTable.Rd man/inversionGR.Rd man/scoreInvHap.Rd man/adaptRefs.Rd man/scoreInvHapRes-class.Rd man/Refs.Rd man/SNPsR2.Rd man/classifSNPs.Rd man/checkSNPs.Rd man/prepareMap.Rd

scoreInvHap documentation built on Feb. 6, 2021, 2 a.m.