Man pages for scp
Mass Spectrometry-Based Single-Cell Proteomics Data Analysis
| aggregateFeaturesOverAssays | Aggregate features over multiple assays |
| computeFDR | Compute FDR from posterior error probabilities PEP |
| computeMedianCV | Compute the median coefficient of variation (CV) per cell |
| computeSCR | Compute the sample over carrier ratio (SCR) |
| divideByReference | Divide assay columns by a reference column |
| mqScpData | Example MaxQuant/SCoPE2 output |
| readSCP | Read single-cell proteomics data as a QFeatures object from... |
| readSingleCellExperiment | Read SingleCellExperiment from tabular data |
| rowDataToDF | Extract the 'rowData' of a 'QFeatures' object to a... |
| sampleAnnotation | Single cell sample annotation |
| scp1 | Single Cell QFeatures data |
| transferColDataToAssay | Transfer the 'colData' to an Assay |
