scuttle-pkg: Single-cell utilities

Description Author(s)


The scuttle package provides some utility functions for single-cell 'omics data analysis. This includes some simple methods for computing and filtering on quality control; basic data transformations involving various types of scaling normalization; and flexible aggregation across cells or features.

scuttle also implements wrapper functions that simplify boilerplate for developers of client packages. This includes packages such as scran, scater and DropletUtils, to name a few. Note that much of the code here was inherited from the scater package.


Aaron Lun

scuttle documentation built on Dec. 19, 2020, 2 a.m.