splitG: Output the maximum potential scale reduction statistic of all...
In selectKSigs: Selecting the number of mutational signatures using a perplexity-based measure and cross-validation
Description
Usage
Arguments
Value
Examples
Description
Output the maximum potential scale reduction statistic of all parameters
estimated
Usage
1
splitG(inputG, Kfold = 3)
Arguments
inputG
a MutationFeatureData S4 class output by the pmsignature.
Kfold
an integer number of the number of cross-validation folds.
Value
a matrix made of perplexity from the results of cross-validation.
Examples
1
2
load(system.file("extdata/sample.rdata", package = "selectKSigs"))
G_split <- splitG(G, Kfold = 3)
selectKSigs documentation built on Nov. 8, 2020, 5:38 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
Output the maximum potential scale reduction statistic of all parameters estimated
Usage
1 | splitG(inputG, Kfold = 3)
|
Arguments
inputG |
a MutationFeatureData S4 class output by the pmsignature. |
Kfold |
an integer number of the number of cross-validation folds. |
Value
a matrix made of perplexity from the results of cross-validation.
Examples
1 2 | load(system.file("extdata/sample.rdata", package = "selectKSigs"))
G_split <- splitG(G, Kfold = 3)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.