specL: specL - Prepare Peptide Spectrum Matches for Use in Targeted Proteomics
Version 1.10.0

specL provides a function for generating spectra libraries which can be used for MRM SRM MS workflows in proteomics. The package provides a BiblioSpec reader, a function which can add the protein information using a FASTA formatted amino acid file, and an export method for using the created library in the Spectronaut software.

Package details

AuthorChristian Trachsel [aut], Christian Panse [aut, cre], Jonas Grossmann [aut], Witold E. Wolski [ctb]
Bioconductor views MassSpectrometry Proteomics
MaintainerChristian Panse <[email protected]>, Witold E. Wolski <[email protected]>
LicenseGPL-3
Version1.10.0
URL https://github.com/fgcz/specL
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("specL")

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specL documentation built on May 31, 2017, 11:19 a.m.