specL: specL - Prepare Peptide Spectrum Matches for Use in Targeted Proteomics

provides a function for generating spectra libraries which can be used for MRM SRM MS workflows in proteomics. The package provides a BiblioSpec reader, a function which can add the protein information using a FASTA formatted amino acid file, and an export method for using the created library in the Spectronaut software.

Package details

AuthorChristian Trachsel [aut], Christian Panse [aut, cre] (0000-0003-1975-3064), Jonas Grossmann [aut] (0000-0002-6899-9020), Witold E. Wolski [ctb]
Bioconductor views MassSpectrometry Proteomics
MaintainerChristian Panse <[email protected]>, Witold E. Wolski <[email protected]>
URL https://github.com/fgcz/specL
Package repositoryView on Bioconductor
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specL documentation built on Nov. 1, 2018, 3:59 a.m.