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The spqn package implements spatial quantile normalization (SpQN). This method was developed to remove a mean-correlation relationship in correlation matrices built from gene expression data. It can serve as pre-processing step prior to a co-expression analysis.
Package details |
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| Author | Yi Wang [cre, aut], Kasper Daniel Hansen [aut] |
| Bioconductor views | GraphAndNetwork NetworkInference Normalization |
| Maintainer | Yi Wang <yiwangthu5@gmail.com> |
| License | Artistic-2.0 |
| Version | 1.2.0 |
| URL | https://github.com/hansenlab/spqn |
| Package repository | View on Bioconductor |
| Installation |
Install the latest version of this package by entering the following in R:
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