Files in triform

Triform finds enriched regions (peaks) in transcription factor ChIP-sequencing data

triform-Ex.R

NAMESPACE

DESCRIPTION

build/vignette.rds

R/triform.R R/preprocess.R

vignettes/triform.Rnw

vignettes/triform.bib

vignettes/auto/triform.el

man/triform.Rd man/triform-package.Rd man/preprocess.Rd tests/runTests.R

inst/CITATION

inst/doc/triform.Rnw

inst/doc/GPL.txt

inst/doc/triform.pdf inst/doc/triform.R

inst/extdata/backgr_huds_Gm12878_rep1.bed

inst/extdata/config.yml

inst/extdata/srf_huds_Gm12878_rep2.bed

inst/extdata/srf_huds_Gm12878_rep1.bed

inst/extdata/backgr_huds_Gm12878_rep2.bed

inst/unitTests/test_preprocess.R

inst/unitTests/data/t2/mockdata.RData

inst/unitTests/data/t1/mockdata.bed

inst/unitTests/data/t3/chrX_mockdata.RData

inst/unitTests/data/t3/chrY_mockdata.RData

inst/unitTests/data/t3/chrX.RData

inst/unitTests/data/t3/chrY.RData

triform documentation built on April 28, 2020, 7 p.m.