API for tximeta
Transcript Quantification Import with Automatic Metadata
| Global functions | |
|---|---|
| .onLoad | Source code |
| addCDS | Man page Source code |
| addExons | Man page Source code |
| addIds | Man page Source code |
| bfclocFile | Source code |
| checkAssays2Txps | Source code |
| genome2UCSC | Source code |
| getBFCLoc | Source code |
| getMetaInfo | Source code |
| getRanges | Source code |
| getTxDb | Source code |
| getTximetaBFC | Man page Source code |
| getTxomeInfo | Source code |
| gtf2RefSeq | Source code |
| linkedTxome | Man page |
| loadLinkedTxome | Man page Source code |
| makeDGEList | Man page Source code |
| makeDuplicateTxpsList | Source code |
| makeDuplicateTxpsTable | Source code |
| makeLinkedTxome | Man page Source code |
| makeUnrangedSE | Source code |
| missingMetadata | Source code |
| readBFCLocFile | Source code |
| rearrangeInfReps | Source code |
| reshapeMetaInfo | Source code |
| retrieveCDNA | Man page Source code |
| retrieveDb | Man page Source code |
| setTximetaBFC | Man page Source code |
| splitInfReps | Source code |
| splitSE | Man page Source code |
| stashLinkedTxome | Source code |
| summarizeToGene,SummarizedExperiment-method | Man page |
| summarizeToGene.SummarizedExperiment | Source code |
| tximeta | Man page Source code |
| tximeta-package | Man page |
| writeBFCLocFile | Source code |
