retrieveDb: Retrieve the TxDb or EnsDb associated with a...
In tximeta: Transcript Quantification Import with Automatic Metadata
Description
Usage
Arguments
Value
Examples
Description
SummarizedExperiment objects returned by tximeta have
associated TxDb or EnsDb databases which are cached locally and used
to perform various metadata related tasks. This helper function
retrieves the database itself for the user to perform any additional
operations.
Usage
1
retrieveDb(se)
Arguments
se
the SummarizedExperiment
Value
a database object
Examples
1
2
example(tximeta)
edb <- retrieveDb(se)
tximeta documentation built on April 13, 2021, 6:01 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
SummarizedExperiment objects returned by tximeta have
associated TxDb or EnsDb databases which are cached locally and used
to perform various metadata related tasks. This helper function
retrieves the database itself for the user to perform any additional
operations.
Usage
1 | retrieveDb(se)
|
Arguments
se |
the SummarizedExperiment |
Value
a database object
Examples
1 2 | example(tximeta)
edb <- retrieveDb(se)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.