unifiedWMWqPCR: Unified Wilcoxon-Mann Whitney Test for testing differential expression in qPCR data

This packages implements the unified Wilcoxon-Mann-Whitney Test for qPCR data. This modified test allows for testing differential expression in qPCR data.

AuthorJan R. De Neve & Joris Meys
Date of publicationNone
MaintainerJoris Meys <Joris.Meys@UGent.be>
LicenseGPL (>=2)
Version1.10.0

View on Bioconductor

Functions

as.matrix.uwmwEstimate Man page
as.matrix,uwmwEstimate-method Man page
as.matrix.uwmwRes Man page
as.matrix,uwmwRes-method Man page
coef Man page
coef,uwmwRes-method Man page
esttype Man page
esttype,uwmwEstimate-method Man page
Extract Man page
forestplot Man page
forestplot,ANY-method Man page
forestplot.internal Man page
forestplot,uwmwEstimate-method Man page
forestplot,uwmwRes-method Man page
getEstimate Man page
getEstimate,uwmwRes-method Man page
getOrder Man page
getOrder,uwmwRes-method Man page
groupinfo Man page
groupinfo,uwmwEstimate-method Man page
groupinfo,uwmwRes-method Man page
housekeeping Man page
housekeeping,uwmwEstimate-method Man page
housekeeping,uwmwRes-method Man page
is.unsorted Man page
is.unsorted,uwmwRes-method Man page
length,uwmwEstimate-method Man page
length,uwmwRes-method Man page
logor Man page
logor,uwmwRes-method Man page
names,uwmwEstimate-method Man page
names,uwmwRes-method Man page
NBdata Man page
NBgroups Man page
NBmat Man page
oddsRatio Man page
oddsRatio,uwmwRes-method Man page
orderedBy Man page
orderedBy,uwmwEstimate-method Man page
orderedBy,uwmwRes-method Man page
order,uwmwRes-method Man page
plot,uwmwRes,ANY-method Man page
pval Man page
pval,uwmwRes-method Man page
ref Man page
ref,uwmwEstimate-method Man page
se Man page
se,uwmwEstimate-method Man page
se,uwmwRes-method Man page
sort.uwmwRes Man page
sort,uwmwRes-method Man page
type Man page
type,uwmwEstimate-method Man page
type,uwmwRes-method Man page
unifiedWMWqPCR Man page
unifiedWMWqPCR-package Man page
unorder Man page
unorder,ANY-method Man page
unorder,uwmwRes-method Man page
uWMW Man page
uwmw_Accessors Man page
uWMW,data.frame-method Man page
uwmwEstimate Man page
[,uwmwEstimate,ANY,ANY-method Man page
[,uwmwEstimate,ANY-method Man page
[,uwmwEstimate,character,ANY-method Man page
[,uwmwEstimate,character-method Man page
uwmwEstimate-class Man page
uwmw_Extract Man page
uWMW,matrix-method Man page
uWMWqPCR Man page
uWMW,qPCRset-method Man page
uwmwRes Man page
[,uwmwRes,ANY,ANY-method Man page
[,uwmwRes,ANY-method Man page
[,uwmwRes,character,ANY-method Man page
[,uwmwRes,character-method Man page
uwmwRes-class Man page
vcov Man page
vcov,uwmwRes-method Man page
volcanopar Man page
volcano-par Man page
volcanoplot Man page
volcanoplot,MArrayLM-method Man page
volcanoplot,matrix-method Man page
volcanoplot,numeric-method Man page
volcanoplotpar Man page
volcanoplot-par Man page
volcanoplot,uwmwRes-method Man page
zval Man page
zval,uwmwRes-method Man page

Files

unifiedWMWqPCR/DESCRIPTION
unifiedWMWqPCR/NAMESPACE
unifiedWMWqPCR/R
unifiedWMWqPCR/R/Datasets.R unifiedWMWqPCR/R/S3Generics.R unifiedWMWqPCR/R/allGenerics.R unifiedWMWqPCR/R/as.matrix.uwmwEstimate.R unifiedWMWqPCR/R/as.matrix.uwmwRes.R unifiedWMWqPCR/R/forestplot_methods.R unifiedWMWqPCR/R/getEstimate_methods.R unifiedWMWqPCR/R/groups.message.R unifiedWMWqPCR/R/outer.h.f.R unifiedWMWqPCR/R/outer.o.f.R unifiedWMWqPCR/R/plotMethoduwmwRes.R unifiedWMWqPCR/R/prepdf.R unifiedWMWqPCR/R/sandwich1.f.R unifiedWMWqPCR/R/sandwich2.f.R unifiedWMWqPCR/R/sandwich3.f.R unifiedWMWqPCR/R/sort.uwmwRes.R unifiedWMWqPCR/R/uWMW.H.R unifiedWMWqPCR/R/uWMW.O.R unifiedWMWqPCR/R/uWMW_Extract.R unifiedWMWqPCR/R/uWMW_internal.R unifiedWMWqPCR/R/uWMW_methods.R unifiedWMWqPCR/R/unifiedWMWqPCR-package.R unifiedWMWqPCR/R/uwmwEstimate_Class.R unifiedWMWqPCR/R/uwmwRes_Class.R unifiedWMWqPCR/R/uwmw_Accessors.R unifiedWMWqPCR/R/uwmw_Showmethods.R unifiedWMWqPCR/R/volcano-internal.R unifiedWMWqPCR/R/volcanoplot.R unifiedWMWqPCR/R/wmw.f.R
unifiedWMWqPCR/build
unifiedWMWqPCR/build/vignette.rds
unifiedWMWqPCR/data
unifiedWMWqPCR/data/NBdata.rda
unifiedWMWqPCR/data/NBmat.rda
unifiedWMWqPCR/inst
unifiedWMWqPCR/inst/CITATION
unifiedWMWqPCR/inst/NEWS
unifiedWMWqPCR/inst/doc
unifiedWMWqPCR/inst/doc/unifiedWMWqPCR.R
unifiedWMWqPCR/inst/doc/unifiedWMWqPCR.Rnw
unifiedWMWqPCR/inst/doc/unifiedWMWqPCR.pdf
unifiedWMWqPCR/man
unifiedWMWqPCR/man/NBdata.Rd unifiedWMWqPCR/man/as.matrix.uwmwEstimate.Rd unifiedWMWqPCR/man/as.matrix.uwmwRes.Rd unifiedWMWqPCR/man/forestplot-methods.Rd unifiedWMWqPCR/man/getEstimate-methods.Rd unifiedWMWqPCR/man/plot.Rd unifiedWMWqPCR/man/sort.uwmwRes.Rd unifiedWMWqPCR/man/uWMW-methods.Rd unifiedWMWqPCR/man/unifiedWMWqPCR-package.Rd unifiedWMWqPCR/man/uwmwEstimate-class.Rd unifiedWMWqPCR/man/uwmwRes-class.Rd unifiedWMWqPCR/man/uwmw_Accessors.Rd unifiedWMWqPCR/man/uwmw_Extract.Rd unifiedWMWqPCR/man/volcanopar.Rd unifiedWMWqPCR/man/volcanoplot-methods.Rd
unifiedWMWqPCR/vignettes
unifiedWMWqPCR/vignettes/unifiedWMWqPCR.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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