API for viper
Virtual Inference of Protein-activity by Enriched Regulon analysis
| Global functions | |
|---|---|
| aREA | Man page Source code |
| aecdf | Man page Source code |
| aecdf1 | Source code |
| approxk2d | Man page Source code |
| aracne2regulon | Man page Source code |
| aracne2regulon4cnv | Man page Source code |
| as.dist.signatureDistance | Man page Source code |
| bootstrapTtest | Man page |
| bootstrapTtest,ExpressionSet-method | Man page |
| bootstrapTtest,matrix-method | Man page |
| bootstrapViper | Man page Source code |
| bootstrapmsviper | Man page Source code |
| comNames | Man page Source code |
| comregulationAnalysis | Source code |
| distMode | Man page |
| fcvarna | Man page Source code |
| filterCV | Man page |
| filterCV,ExpressionSet-method | Man page |
| filterCV,matrix-method | Man page |
| filterColMatrix | Man page Source code |
| filterRowMatrix | Man page Source code |
| frcv | Man page Source code |
| frvarna | Man page Source code |
| groupPwea3 | Man page Source code |
| gsea2ESint | Source code |
| integrateSignatures | Man page Source code |
| ledge | Man page Source code |
| loadExpset | Man page Source code |
| msviper | Man page Source code |
| msviper-class | Man page |
| msviperAnnot | Man page Source code |
| msviperClass | Man page Source code |
| msviperCombinatorial | Man page Source code |
| msviperSynergy | Man page Source code |
| plot.msviper | Man page Source code |
| ppwea3NULLf | Source code |
| print.msviper | Source code |
| print.regulon | Source code |
| pruneRegulon | Man page Source code |
| pwea3NULLf | Man page Source code |
| pwea3NULLgroups | Man page Source code |
| readAracneAdj | Source code |
| regulon-class | Man page |
| regulonScore | Source code |
| rowTtest | Man page |
| rowTtest,ExpressionSet-method | Man page |
| rowTtest,matrix-method | Man page |
| rowVars | Source code |
| scale.signatureDistance | Man page Source code |
| scaleGroups | Man page Source code |
| selectTFs | Source code |
| shadow | Man page Source code |
| shadowRegulon | Man page Source code |
| sigT | Man page |
| signatureDistance | Man page Source code |
| signatureDistance-class | Man page |
| summary.msviper | Man page Source code |
| summary.regulon | Source code |
| ttestNull | Man page |
| ttestNull,ExpressionSet-method | Man page |
| ttestNull,matrix-method | Man page |
| updateRegulon | Source code |
| viper | Man page Source code |
| viperRPT | Man page Source code |
| viperSignature | Man page |
| viperSignature,ExpressionSet-method | Man page |
| viperSignature,matrix-method | Man page |
| viperSignature-class | Man page |
| viperSimilarity | Man page Source code |
