type2Exten: Convert Method Type to Tree Extension
In xps: Processing and Analysis of Affymetrix Oligonucleotide Arrays including Exon Arrays, Whole Genome Arrays and Plate Arrays
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Examples
Description
Convert Method Type to Tree Extension.
Usage
1
type2Exten(type, datatype)
Arguments
type
method type.
datatype
data type.
Details
For every datatype different methods, i.e. algorithms exist which can be applied.
Valid datatypes are ‘preprocess’ and ‘normation’.
For datatype ‘preprocess’ the following methods can be applied:
mean: trimmed mean
median: median
quantile: quantile
tukeybiweight: tukey biweight
medianpolish: median polish
For datatype ‘normation’ the following methods can be applied:
mean: trimmed mean
median: median
quantile: quantile
lowess: lowess
supsmu: supsmu
The tree extensions are described in validTreetype.
Value
A character with the correct tree extension.
Author(s)
Christian Stratowa
See Also
Examples
1
2
3
type2Exten("quantile","preprocess")
type2Exten("medianpolish","preprocess")
type2Exten("supsmu","normation")
xps documentation built on Nov. 8, 2020, 6 p.m.
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Description Usage Arguments Details Value Author(s) See Also Examples
Description
Convert Method Type to Tree Extension.
Usage
1 | type2Exten(type, datatype)
|
Arguments
type |
method type. |
datatype |
data type. |
Details
For every datatype different methods, i.e. algorithms exist which can be applied.
Valid datatypes are ‘preprocess’ and ‘normation’.
For datatype ‘preprocess’ the following methods can be applied:
mean: | trimmed mean |
median: | median |
quantile: | quantile |
tukeybiweight: | tukey biweight |
medianpolish: | median polish |
For datatype ‘normation’ the following methods can be applied:
mean: | trimmed mean |
median: | median |
quantile: | quantile |
lowess: | lowess |
supsmu: | supsmu |
The tree extensions are described in validTreetype.
Value
A character with the correct tree extension.
Author(s)
Christian Stratowa
See Also
Examples
1 2 3 | type2Exten("quantile","preprocess")
type2Exten("medianpolish","preprocess")
type2Exten("supsmu","normation")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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