validCall-methods: Get Valid Detection Call Values
In xps: Processing and Analysis of Affymetrix Oligonucleotide Arrays including Exon Arrays, Whole Genome Arrays and Plate Arrays

Description Arguments Details Value Author(s) See Also

Extracts valid present call values with unit names as row names.

Usage

validCall(object, which = "UnitName")
validPVal(object, which = "UnitName")

`object`	object of class `CallTreeSet`.
`which`	name of column containing unit name.

Method validCall returns the present calls from slot detcall as data.frame and uses column which as row names, usually the probeset IDs stored in column “UnitName”.

Method validPVal returns the detection call p-values from slot data as data.frame and uses column which as row names, usually the probeset IDs stored in column “UnitName”.

A data.frame.

Christian Stratowa

validData, validExpr

xps documentation built on Nov. 8, 2020, 6 p.m.