Man pages for yaqcaffy
Affymetrix expression data quality control and reproducibility analysis
| getAllInt | Get the summerized MAS5 values for a given spike probe |
| getBioProbes | Get the names of the Bio spike probes on the array |
| getOutliers | Get outliers for the different YAQCStatsObject slots |
| getQCRatios | Compute qc probe ratios using GCOS intensity values |
| getRatioProbes | Get the names of degradation control probes on the array |
| getSpikeProbes | Get the names of all spike probes on the array |
| probeSelectionInterface | Tcltk Interface to Generate an Instance of YaqcControlProbes... |
| reprodPlot | Plot human whole genome GeneChips reproductibility |
| yaqc.affy | 'YAQCStats' constructor |
| YaqcControlProbes-class | Class "YaqcControlProbes" |
| yaqc.plot | Plots a YAQCStats object |
| YAQCStats-class | Class "YAQCStats" |
