getQCRatios: Compute qc probe ratios using GCOS intensity values
In yaqcaffy: Affymetrix expression data quality control and reproducibility analysis
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
This function computes the 3'/5' ratios of the GAPDh and β-actin
qc probes using the GCOS intensity values.
Usage
1
getQCRatios(YAQCStatsObject)
Arguments
YAQCStatsObject
an object of class YAQCStats
Value
An object of type "matrix" with two qc ratios per array.
Author(s)
Laurent Gatto
See Also
getRatioProbes
Examples
1
2
3
4
5
6
## load a dataset
library(affydata)
data(Dilution)
## create yaqc object
qobj <- yaqc(Dilution)
getQCRatios(qobj)
yaqcaffy documentation built on Nov. 8, 2020, 8:31 p.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
This function computes the 3'/5' ratios of the GAPDh and β-actin qc probes using the GCOS intensity values.
Usage
1 | getQCRatios(YAQCStatsObject)
|
Arguments
YAQCStatsObject |
an object of class YAQCStats |
Value
An object of type "matrix" with two qc ratios per array.
Author(s)
Laurent Gatto
See Also
getRatioProbes
Examples
1 2 3 4 5 6 | ## load a dataset
library(affydata)
data(Dilution)
## create yaqc object
qobj <- yaqc(Dilution)
getQCRatios(qobj)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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