ActiveDriverWGS | ActiveDriverWGS is a driver discovery tool for simple somatic... |
ADWGS_test | ADWGS_test executes the statistical test for ActiveDriverWGS |
cancer_genes | cancer_genes |
cancer_gene_sites | post-translational modification sites found in cancer genes |
cll_mutations | CLL mutations |
dot-fix_all_results | fix_all_results verifies that the results table has the... |
dot-get_3n_context_of_mutations | This function finds the tri-nucleotide context of mutations |
dot-get_obs_exp | Calculates the number of expected mutations based |
dot-get_signf_results | Returns significant results |
dot-make_mut_signatures | Makes mutational signatures |
dot-split_coord_fragments_in_BED | Splits a BED12 file into separate regions |
format_muts | This function filters hypermutated samples and returns the... |
prepare_elements_from_BED12 | Prepares element coords from a BED12 file |
prepare_elements_from_BED4 | Prepares element coords from a BED4 file |
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