Man pages for ActiveDriverWGS
A Driver Discovery Tool for Cancer Whole Genomes

ActiveDriverWGSActiveDriverWGS is a driver discovery tool for simple somatic...
ADWGS_testADWGS_test executes the statistical test for ActiveDriverWGS
cancer_genescancer_genes
cancer_gene_sitespost-translational modification sites found in cancer genes
cll_mutationsCLL mutations
dot-fix_all_resultsfix_all_results verifies that the results table has the...
dot-get_3n_context_of_mutationsThis function finds the tri-nucleotide context of mutations
dot-get_obs_expCalculates the number of expected mutations based
dot-get_signf_resultsReturns significant results
dot-make_mut_signaturesMakes mutational signatures
dot-split_coord_fragments_in_BEDSplits a BED12 file into separate regions
format_mutsThis function filters hypermutated samples and returns the...
prepare_elements_from_BED12Prepares element coords from a BED12 file
prepare_elements_from_BED4Prepares element coords from a BED4 file
ActiveDriverWGS documentation built on Sept. 3, 2022, 5:05 p.m.