cll_mutations | R Documentation |
CLL whole genome simple somatic mutations from Alexandrov et, 2013
data(cll_mutations)
A data frame containing the following columns: chr, pos1, pos2, ref, alt, patient.
autosomal chromosomes as chr1 to chr22 and sex chromosomes as chrX and chrY
the start position of the mutation in base 1 coordinates
the end position of the mutation in base 1 coordinates
the reference allele as a string containing the bases A, T, C or G
the alternate allele as a string containing the bases A, T, C or G
the patient identifier as a string
Alexandrov, Ludmil B., et al. "Signatures of mutational processes in human cancer." Nature 500.7463 (2013): 415. (PubMed)
data(cll_mutations) data(cancer_genes) ActiveDriverWGS(mutations = cll_mutations, elements = cancer_genes)
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