AlgebraicHaploPackage: Haplotype Two Snips Out of a Paired Group of Patients
Version 1.2

Two unordered pairs of data of two different snips positions is haplotyped by resolving a small number ob closed equations.

AuthorJan Wolfertz
Date of publication2015-10-31 08:46:53
MaintainerJan Wolfertz <Jan.wolfertz@uni-duesseldorf.de>
LicenseGPL-2
Version1.2
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("AlgebraicHaploPackage")

Getting started

Package overview

Popular man pages

AlgebraicHaploPackage-package: AlgebraicHaploPackage- The package haplotype a contingency of...
callhaplotype: calcultes the cotigency table of the haplotypes
cubic: Function that can resolve the cubic equation numerical stable...
findoptimal: Chose the most likely solution of the three potential onces.
haplotypeit: Haplotype a 3 x 3 counting matrix.
optimalfrequency: Evaluate potential haplotypes.
See all...

All man pages Function index File listing

Man pages

AlgebraicHaploPackage-package: AlgebraicHaploPackage- The package haplotype a contingency of...
callhaplotype: calcultes the cotigency table of the haplotypes
cubic: Function that can resolve the cubic equation numerical stable...
findoptimal: Chose the most likely solution of the three potential onces.
haplotypeit: Haplotype a 3 x 3 counting matrix.
optimalfrequency: Evaluate potential haplotypes.

Functions

AlgebraicHaploPackage Man page
AlgebraicHaploPackage-package Man page
callhaplotype Man page Source code
cubic Man page Source code
findoptimal Man page Source code
haplotypeit Man page Source code
optimalfrequency Man page Source code

Files

inst
inst/doc
inst/doc/algebraichaplo.Rnw
inst/doc/algebraichaplo.pdf
inst/testcalls.R
NAMESPACE
R
R/AlgebraicHaplo.R
vignettes
vignettes/algebraichaplo.Rnw
vignettes/Bibliography.bib
MD5
build
build/vignette.rds
DESCRIPTION
man
man/cubic.Rd
man/haplotypeit.Rd
man/findoptimal.Rd
man/callhaplotype.Rd
man/optimalfrequency.Rd
man/AlgebraicHaploPackage-package.Rd
AlgebraicHaploPackage documentation built on May 19, 2017, 7:48 p.m.

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