Man pages for AnimalSequences
Analyse Animal Sequential Behaviour and Communication
| association_metrics | Calculate Association Metrics for Sequences |
| average_seq_length | Calculate the Average Length of Sequences |
| calculate_conditional_entropy | Calculate Conditional Entropy of B given A in Bits |
| calculate_distance_matrix | Calculate Distance Matrix from Co-occurrence Matrix |
| calculate_transition_counts | Calculate Transition Counts from Sequences |
| calculate_transition_probs | Calculate Transition Probabilities from Sequences |
| cluster_elements | Cluster Elements Using Hierarchical Clustering |
| compare_distinct_elements_per_list_item | Compare True and Shuffled Distinct Elements per List Item |
| cooccurrence_matrix | Calculate Co-occurrence Matrix for Sequences |
| count_distinct_elements | Count Distinct Elements in Sequences |
| count_distinct_elements_per_list_item | Count Distinct Elements per List Item |
| count_distinct_elements_per_list_item_shuffled | Count Distinct Elements per List Item in Shuffled Sequences |
| element_covariate | Calculate Element-Covariate Conditional Probabilities |
| element_covariate_network | Plot the network of elements and covariates based on the long... |
| element_duration | Calculate Individual Element Durations |
| element_position | Calculate Median Position of Each Element in Sequences |
| find_most_similar_columns | Find Most Similar Columns in a Distance Matrix |
| generate_sequence | Generate a Sequence of Elements |
| long_to_sequences | Convert Long Format to Sequences |
| median_seq_length | Calculate the Median Length of Sequences |
| menzerath_plot | Create a Menzerath-Altmann Plot |
| min_max_seq_length | Calculate the Minimum and Maximum Length of Sequences |
| perform_clustering | Perform Various Clustering Methods |
| plot_seq_length_distribution | Plot the Distribution of Sequence Lengths |
| redundancy | Calculate Observed and Expected Redundancy of Sequences |
| sd_seq_length | Calculate the Standard Deviation of Sequence Lengths |
| sequence_duration_summary | Summarize Sequence Durations |
| sequence_length_summary | Summarize Sequence Lengths |
| sequence_length_summary_covariate | Summarize Sequence Lengths by Covariate |
| sequence_length_summary_element | Summarize Sequence Lengths by Element |
| sequences_to_long | Convert Sequences to Long Format |
| shuffle_sequences_across | Shuffle Elements Across All Sequences |
| shuffle_sequences_within | Shuffle Elements Within Each Sequence |
| temporal_overlap | Temporal Overlap |
| transition_chisq | Perform a Chi-Squared Test for Transition Counts |
| transition_entropy | Calculate Transition Entropy for Sequences |
| transition_predictions | Transition Predictions |
| transition_test | Perform a Statistical Test for Transition Probabilities |
| zipf_plot | Create a Zipf's Law Plot |
