association_metrics: Calculate Association Metrics for Sequences

In AnimalSequences: Analyse Animal Sequential Behaviour and Communication

Calculate Association Metrics for Sequences

Description

This function calculates various association metrics for elements in a sequence, such as Pointwise Mutual Information (PMI), normalized PMI, attraction, reliance, Delta P, z-score, t-score, Chi-squared, Jaccard coefficient, Dice coefficient, log odds ratio, and geometric mean.

Usage

association_metrics(sequences)

Arguments

sequences

A character vector of sequences to analyze.

Value

A data frame with the calculated association metrics for each dyad (pair of elements).

Examples

# Example usage:
sequences <- c("A B C", "A B", "A C", "B C", "A B C D")
result <- association_metrics(sequences)
print(result)

AnimalSequences documentation built on Sept. 30, 2024, 9:18 a.m.