sequence_length_summary: Summarize Sequence Lengths

In AnimalSequences: Analyse Animal Sequential Behaviour and Communication

Summarize Sequence Lengths

Description

This function calculates summary statistics for the lengths of sequences of elements, including mean, standard deviation, median, minimum, and maximum lengths. It also counts the number of distinct elements and compares this to shuffled sequences.

Usage

sequence_length_summary(sequences)

Arguments

sequences

A character vector where each element is a sequence of elements separated by spaces.

Value

A data frame with the following columns:

mean_seq_elements	The mean length of the sequences.
sd_seq_elements	The standard deviation of the sequence lengths.
median_seq_elements	The median length of the sequences.
min_seq_elements	The minimum length of the sequences.
max_seq_elements	The maximum length of the sequences.
distinct_elements	The number of distinct elements across all sequences.
pvalue_distinct_elements	The p-value comparing the true number of distinct elements to shuffled sequences.

Examples

sequences <- c('hello world', 'hello world hello', 'hello world hello world')
sequence_length_summary(sequences)

AnimalSequences documentation built on Sept. 30, 2024, 9:18 a.m.