sequence_length_summary_element: Summarize Sequence Lengths by Element

In AnimalSequences: Analyse Animal Sequential Behaviour and Communication

Summarize Sequence Lengths by Element

Description

This function calculates summary statistics for the lengths of sequences containing specific distinct elements. It performs the summary for each distinct element found across the sequences.

Usage

sequence_length_summary_element(sequences)

Arguments

sequences

A character vector where each element is a sequence of elements separated by spaces.

Value

A data frame with the following columns:

element	The distinct element.
mean_seq_elements	The mean length of sequences containing the element.
sd_seq_elements	The standard deviation of the lengths of sequences containing the element.
median_seq_elements	The median length of sequences containing the element.
min_seq_elements	The minimum length of sequences containing the element.
max_seq_elements	The maximum length of sequences containing the element.
distinct_elements	The number of distinct elements in sequences containing the element.
pvalue_distinct_elements	The p-value comparing the true number of distinct elements to shuffled sequences.

Examples

sequences <- c('hello world', 'hello world hello', 'hello world hello world')
sequence_length_summary_element(sequences)

AnimalSequences documentation built on Sept. 30, 2024, 9:18 a.m.