API for AntibodyForests
Delineating Inter- And Intra-Antibody Repertoire Evolution
| Global functions | |
|---|---|
| Af_PLM_dataframe | Man page Source code |
| Af_add_node_feature | Man page Source code |
| Af_build | Man page Source code |
| Af_cluster_metrics | Man page Source code |
| Af_cluster_node_features | Man page Source code |
| Af_compare_PLM | Man page Source code |
| Af_compare_across_repertoires | Man page Source code |
| Af_compare_methods | Man page Source code |
| Af_compare_within_repertoires | Man page Source code |
| Af_distance_boxplot | Man page Source code |
| Af_distance_scatterplot | Man page Source code |
| Af_edge_RMSD | Man page Source code |
| Af_get_sequences | Man page Source code |
| Af_metrics | Man page Source code |
| Af_node_size_boxplot | Man page Source code |
| Af_plot_PLM | Man page Source code |
| Af_plot_PLM_mut_vs_cons | Man page Source code |
| Af_plot_tree | Man page Source code |
| Af_sync_nodes | Man page Source code |
| Af_to_newick | Man page Source code |
| PLM_dataframe | Man page |
| VDJ_3d_properties | Man page Source code |
| VDJ_import_IgBLAST_annotations | Man page Source code |
| VDJ_integrate_bulk | Man page Source code |
| VDJ_to_AIRR | Man page Source code |
| af_default | Man page |
| af_mst | Man page |
| af_nj | Man page |
| calculate_GBLD | Man page Source code |
| compare_repertoire | Man page |
| igraph_to_phylo | Man page Source code |
| newick_to_Af | Man page Source code |
| small_af | Man page |
| small_vdj | Man page |
