igraph_to_phylo: Converts an igraph network into a phylogenetic tree as a...
In AntibodyForests: Delineating Inter- And Intra-Antibody Repertoire Evolution
View source: R/igraph_to_phylo.R
igraph_to_phylo R Documentation
Converts an igraph network into a phylogenetic tree as a phylo object.
Description
Converts an igraph network into a phylogenetic tree as a phylo object.
Usage
igraph_to_phylo(tree, solve_multichotomies)
Arguments
tree
igraph object
solve_multichotomies
boolean - whether to remove multichotomies in the resulting phylogenetic tree using ape::multi2di
Value
phylogenetic tree
Examples
phylo_object <- igraph_to_phylo(AntibodyForests::small_af[["S1"]][["clonotype1"]]$igraph)
AntibodyForests documentation built on Aug. 8, 2025, 6:49 p.m.
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View source: R/igraph_to_phylo.R
| igraph_to_phylo | R Documentation |
Converts an igraph network into a phylogenetic tree as a phylo object.
Description
Converts an igraph network into a phylogenetic tree as a phylo object.
Usage
igraph_to_phylo(tree, solve_multichotomies)
Arguments
tree |
igraph object |
solve_multichotomies |
boolean - whether to remove multichotomies in the resulting phylogenetic tree using ape::multi2di |
Value
phylogenetic tree
Examples
phylo_object <- igraph_to_phylo(AntibodyForests::small_af[["S1"]][["clonotype1"]]$igraph)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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