Functions that estimate sample (taxonomic) composition from biomarker data
bce1 estimates probability distributions of a sample composition
based on an input ratio matrix,
biomarker ratios in (field) samples, and an input data matrix,
B, containing the biomarker ratios for several taxonomic groups
tlsce estimates the total least squares solution
This version differs from the previous version <2 in that a different MCMC method is used that shows better convergence properties and has a more sound underlying statistical model.
|License:||GNU Public License 2 or above|
Karel Van den Meersche (Maintainer)
Van den Meersche, K., K. Soetaert and J.J. Middelburg (2008) A Bayesian compositional estimator for microbial taxonomy based on biomarkers, Limnology and Oceanography Methods 6, 190-199
bce the new function, with better convergence properties
BCE the original function (versions < 2)
tlsce total least squares compositional estimator
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