bceInput | R Documentation |
The datamatrix contains a set of biomarker measurements for a number of field samples.
The ratiomatrix contains biomarker data of a number of biological taxa.
BCE()
uses these matrices to estimate the taxonomical composition
of the samples based on the provided taxa.
For use with the function bce1()
, they have to be transposed.
bceInput
##==================================== ## Graphical representation of the example input data palette(rainbow(12, s = 0.6, v = 0.75)) mp <- apply(bceInput$Rat,MARGIN=2,max) mp2 <- apply(bceInput$Dat,MARGIN=2,max) pstars <- rbind(t(t(bceInput$Rat)/mp),t(t(bceInput$Dat)/mp2)) stars(pstars, len = 0.9, key.loc = c(7.2, -2),scale=FALSE, ncol=5,ylim=c(0,3),main = "bce Input: species + field samples", draw.segments = TRUE, flip.labels=FALSE)
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.