Files in BGmisc

An R Package for Extended Behavior Genetics Analysis

NEWS.md README.md R/makeLinks.R R/checkIDs.R R/buildPedigree.R R/insertEven.R R/documentData.R R/calculateFamilySize.R R/computeRelatedness.R R/helpGeneric.R R/helpPedigree.R R/summarizePedigree.R R/BGmisc-package.R R/checkPedigree.R R/convertPedigree.R R/plotPedigree.R R/readPedigree.R R/checkSex.R R/tweakPedigree.R R/simulatePedigree.R R/identifyModel.R R/cleanPedigree.R inst/doc/partial.Rmd inst/doc/network.Rmd inst/doc/partial.R inst/doc/validation.Rmd inst/doc/analyticrelatedness.Rmd inst/doc/modelingrelatedness.Rmd inst/doc/network.R inst/doc/pedigree.R inst/doc/analyticrelatedness.R inst/doc/modelingrelatedness.R inst/doc/pedigree.Rmd inst/doc/validation.R tests/testthat.R tests/testthat/test-identifyModel.R tests/testthat/test-BGmisc-package.R tests/testthat/test-tweakPedigree.R tests/testthat/test-convertPedigree.R tests/testthat/test-plotPedigree.R tests/testthat/test-simulatePedigree.R tests/testthat/test-insertEven.R tests/testthat/test-summarizePedigrees.R tests/testthat/test-calculateFamilySize.R tests/testthat/test-helpGeneric.R tests/testthat/test-networks.R tests/testthat/test-checkPedigreeNetwork.R tests/testthat/test-makeLinks.R tests/testthat/test-checkIDs.R tests/testthat/test-checkSex.R tests/testthat/test-computeRelatedness.R tests/testthat/test-readPedigrees.R vignettes/partial.Rmd vignettes/network.Rmd vignettes/validation.Rmd vignettes/analyticrelatedness.Rmd vignettes/modelingrelatedness.Rmd vignettes/pedigree.Rmd man/adjustKidsPerCouple.Rd man/BGmisc-package.Rd man/makeLongTree.Rd man/rmvn.Rd man/processParents.Rd man/extractSummaryText.Rd man/ped2ce.Rd man/ped2fam.Rd man/makeTwins.Rd man/ped2graph.Rd man/parseTree.Rd man/checkSex.Rd man/readWikifamilytree.Rd man/createGenDataFrame.Rd man/extract_info.Rd man/makeInbreeding.Rd man/dot-computeTranspose.Rd man/vech.Rd man/ped2maternal.Rd man/summarizePatrilines.Rd man/standardizeColnames.Rd man/identifyComponentModel.Rd man/famSizeCal.Rd man/comp2vech.Rd man/potter.Rd man/assignParentIDs.Rd man/ped2paternal.Rd man/repairIDs.Rd man/calculateSummaryDT.Rd man/nullToNA.Rd man/createFamilyToParentsMapping.Rd man/fitComponentModel.Rd man/ped2mit.Rd man/hazard.Rd man/summarizeMatrilines.Rd man/matchMembers.Rd man/try_na.Rd man/summarizePedigrees.Rd man/repairSex.Rd man/evenInsert.Rd man/com2links.Rd man/dropLink.Rd man/royal92.Rd man/ped2add.Rd man/parseRelationships.Rd man/recodeSex.Rd man/summarizeFamilies.Rd man/markPotentialChildren.Rd man/findFounder.Rd man/checkIDs.Rd man/combine_columns.Rd man/determineSex.Rd man/ASOIAF.Rd man/checkPedigreeNetwork.Rd man/calculateH.Rd man/buildBetweenGenerations.Rd man/buildWithinGenerations.Rd man/assignCoupleIds.Rd man/ped2com.Rd man/compute_parent_adjacency.Rd man/inbreeding.Rd man/allGens.Rd man/plotPedigree.Rd man/resample.Rd man/countPatternRows.Rd man/sizeAllGens.Rd man/relatedness.Rd man/ped2cn.Rd man/simulatePedigree.Rd man/SimPed.Rd man/readGedcom.Rd man/related_coef.Rd man/calculateRelatedness.Rd man/Null.Rd man/inferRelatedness.Rd man/efunc.Rd