markPotentialChildren: Mark and Assign children

In BGmisc: An R Package for Extended Behavior Genetics Analysis

Mark and Assign children

Description

This subfunction marks individuals in a generation as potential sons, daughters, or parents based on their relationships and assigns unique couple IDs. It processes the assignment of roles and relationships within and between generations in a pedigree simulation.

Usage

markPotentialChildren(
  df_Ngen,
  i,
  Ngen,
  sizeGens,
  CoupleF,
  code_male = "M",
  code_female = "F"
)

Arguments

df_Ngen	A data frame for the current generation being processed. It must include columns for individual IDs ('id'), spouse IDs ('spID'), sex ('sex'), and any previously assigned roles ('ifparent', 'ifson', 'ifdau').
i	Integer, the index of the current generation being processed.
Ngen	Integer, the total number of generations in the simulation.
sizeGens	Numeric vector, containing the size (number of individuals) of each generation.
CoupleF	Integer, IT MIGHT BE the number of couples in the current generation.
code_male	The value to use for males. Default is "M"
code_female	The value to use for females. Default is "F"

Value

Modifies 'df_Ngen' in place by updating or adding columns related to individual roles ('ifparent', 'ifson', 'ifdau') and couple IDs ('coupleId'). The updated data frame is also returned for integration into the larger pedigree data frame ('df_Fam').

BGmisc documentation built on June 11, 2025, 1:07 a.m.