Description Usage Arguments Value See Also Examples
View source: R/biodiversityFunctions.R
A function that counts for each grid cell the number of observations per visit for each species.
1 |
x |
an object of class ‘SummarizeBirds’. |
a list
with a data.frame
per grid cell with counts of
observations for each species per visits on each non-empty grid cell.
1 2 3 4 5 6 7 8 9 | grid <- makeGrid(searchPolygon, gridSize = 10)
OB <- organizeBirds(bombusObs, sppCol = "scientificName",
taxonRankCol = "taxonRank", taxonRank = "SPECIES",
simplifySppName = TRUE)
SB <- summarizeBirds(OB, grid=grid)
CM <- communityMatrixGrid(SB)
lCM <- lengths(CM) ## Which cells are empty
## library(vegan)
## R <- lapply(CM[which(lCM>0)], specaccum)
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