Description Usage Arguments Value References See Also Examples
View source: R/biodiversityFunctions.R
This function prepares the organised data into a "records-by-species" matrix summarizing the number of observations (records) per species in the shape required by the functions from the KnowBR package for calculating 'completeness'.
1 |
x |
an object of class ‘OrganizedBirds’ (organised BIRDS Spatial Dataframe). |
format |
the type of matrix to return: type 'A' where each row is a combination of species, location (unique coordinates or visits' ID) and count, or 'B' where each row is a location, each column a species, and the elements of the matrix the counts |
location |
the uniqueness of the position given by the coordinates or the visits' ID |
a data.frame
with a record-by-species matrix
Lobo et al. (2018) <https://doi.org/10.1016/j.ecolind.2018.03.077>
1 2 3 4 5 | grid <- makeGrid(searchPolygon, gridSize = 10)
OB <- organizeBirds(bombusObsShort, sppCol = "scientificName",
taxonRankCol = "taxonRank", taxonRank = "SPECIES",
simplifySppName = TRUE)
RxS <- recBySpp(OB)
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