focalSpReport: Summarise all records for a species

In BIRDS: Biodiversity Information Review and Decision Support

Description

This function will produce a simple visual report for the obsrevation pattern of the focal species. It shows grid cells with records on a map, and bar charts with number of records per year and month.

Usage

focalSpReport(
  x,
  focalSp = NULL,
  long = TRUE,
  polygon = NULL,
  colVis = "grey",
  colPres = "red",
  ...
)

Arguments

x	an object of class ‘SummarizeBirds’.
focalSp	the focal spp to look for.
long	whether the map should be long or wide.
polygon	(optional) an object of class ‘sf’, ‘SpatialPolygon’ or ‘SpatialPolygonDataFrame’. (Default is NULL)
colVis	color to plot visited gird cells
colPres	color to plot grid cells where species is present
...	further plot parameters

Value

a plot with a brief species summary

See Also

summarizeBirds, exportBirds

Examples

OB <- organizeBirds(bombusObsShort, sppCol = "scientificName", simplifySppName = TRUE)
grid <- makeGrid(searchPolygon, gridSize = 10)
SB <- summariseBirds(OB, grid=grid)
allSpp <- listSpecies(SB)
focal <- allSpp[2]
focalSpReport(SB, focalSp=focal)

BIRDS documentation built on June 27, 2021, 1:06 a.m.