plot_traceplots_acf: BLSM traceplots and ACF

In BLSM: Bayesian Latent Space Model

Description

Traceplots and autocorrelation functions for the α variable and a selected node (or pair of nodes in the non-Procrustean framework).

Usage

plot_traceplots_acf(blsm_obj, chosen_node = 1, coordinate = 1,
  chosen_pair = c(1, 2))

Arguments

blsm_obj	BLSM object obtained through estimate_latent_positions
chosen_node	Specified node for traceplot and autocorrelation function (Procrustean framework)
coordinate	Specified coordinate dimension from the n-dimensional latent space
chosen_pair	Specified pair of nodes for traceplot and autocorrelation function (non-Procrustean framework)

Examples

plot_traceplots_acf(example_blsm_obj, chosen_node=3, coordinate=1)

## Not run: 
 # Run the simulation without Procrustean step
 blsm_obj = estimate_latent_positions(example_adjacency_matrix, procrustean = FALSE, 
                          burn_in = 3*10^4, nscan = 10^5)
 
 # Plot 
 plot_traceplots_acf(blsm_obj, chosen_pair=c(2,5))

## End(Not run)

BLSM documentation built on May 2, 2019, 2:45 p.m.