summary.multibasta: Summarizing multiple Bayesian Survival Trajectory Analsys...

In BaSTA: Age-Specific Bayesian Survival Trajectory Analysis from Incomplete Census or Capture-Recapture/Recovery Data

Summarizing multiple Bayesian Survival Trajectory Analsys (BaSTA) model output.

Description

These functions allow users visualize the output from function multibasta.

Usage

## S3 method for class 'multibasta'
summary(object, ...)
## S3 method for class 'multibasta'
print(x, ...)
## S3 method for class 'multibasta'
coef(object, showAll = FALSE, ...)

Arguments

object	An object of class “multibasta”.
x	An object of class “multibasta”.
showAll	Logical whether the coefficients from all models should be shown.
...	Additional arguments to be passed to function print, summary, and coef (see details).

Value

Function coef.multibasta returns a list with the following objects:

coefficients	A list with the basta coefficients for the model with lowes DIC or, if showAll = TRUE, from each model and shape tested.
DICs	A matrix with the DIC values for each model, sorted from the model with lowest DIC to the model with highest DIC.

Author(s)

Fernando Colchero [e-mail], Owen R. Jones [e-mail], and Maren Rebke [e-mail]

See Also

basta, multibasta.

Examples

## Load data:
data("bastaCMRdat", package = "BaSTA")

## Run short version of BaSTA on the data:
multiout <- multibasta(bastaCMRdat, studyStart = 51, studyEnd = 70, 
                 models = c("GO", "WE"), shapes = "simple",
                 niter = 100, burnin = 11, thinning = 10, 
                 nsim = 1, updateJumps = FALSE, parallel = FALSE)

## Print results:
summary(multiout, digits = 3)

BaSTA documentation built on April 12, 2025, 2:31 a.m.